Many clinical informatics tasks that are based on electronic health records (EHR) need relevant patient cohorts to be selected based on findings, symptoms and diseases. Frequently, these conditions are described in radiology reports which can be retrieved using information retrieval (IR) methods. The latest of these techniques utilize neural IR models such as BERT trained on clinical text. However, these methods still lack semantic understanding of the underlying clinical conditions as well as ruled out findings, resulting in poor precision during retrieval. In this paper we combine clinical finding detection with supervised query match learning. Specifically, we use lexicon-driven concept detection to detect relevant findings in sentences. These findings are used as queries to train a Sentence-BERT (SBERT) model using triplet loss on matched and unmatched query-sentence pairs. We show that the proposed supervised training task remarkably improves the retrieval performance of SBERT. The trained model generalizes well to unseen queries and reports from different collections.

Improving Neural Models for Radiology Report Retrieval with Lexicon-based Automated Annotation


**Track:** 
* Information Extraction
* Information Retrieval and Text Mining
* NLP Applications
* Sentiment Analysis and Stylistic Analysis



Virtual PS2 - 6G: Group 3

poster

## Welcome to NAACL 2022!
The Annual Meeting of the North American Chapter of the Association for Computational Linguistics (NAACL) is taking place July 10-15, 2022 as a hybrid event, in Seattle, WA and online. We are happy to welcome all of you to conference! 
 
The main conference program features oral presentations, in-person and virtual posters and demo sessions, a plenary session for our best paper presentations and awards, keynote presentations, a plenary panel on the place of linguistics and symbolic structures in NLP, and an Industrial Track panel on Careers in NLP.
 
Posters (including Findings of NAACL 2022) and demos are grouped by areas for both the in-person and the virtual sessions. For the virtual component, the talks will be on Zoom and the posters and the demos will be in GatherTown. The Student Research Workshop and will have an oral session and a poster session.
 
The program also features 6 Tutorials and 26 Workshops.
 
 We wish you a wonderful conference!
 
[The NAACL 2022 Organizing Committee](https://2022.naacl.org/committees/organization/)

NAACL 2022

2022 Annual Conference of the North American Chapter of the Association for Computational Linguistics

Luyao Shi

1

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Improving Neural Models for Radiology Report Retrieval with Lexicon-based Automated Annotation

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