United States

Agentic repository-level code understanding is essential for automating complex software engineering tasks, yet the field lacks reliable benchmarks. Existing evaluations often overlook the long tail topics and rely on popular repositories where Large Language Models (LLMs) can cheat via memorized knowledge. To address this, we introduce SWE-QA-Pro, a benchmark constructed from diverse, long-tail repositories with executable environments. We enforce topical balance via issue-driven clustering to cover under-represented task types and apply a rigorous difficulty calibration process: questions solvable by direct-answer baselines are filtered out. This results in a dataset where agentic workflows significantly outperform direct answering (e.g., a ~13-point gap for Claude Sonnet 4.5), confirming the necessity of agentic codebase exploration. Furthermore, to tackle the scarcity of training data for such complex behaviors, we propose a scalable synthetic data pipeline that powers a two-stage training recipe: Supervised Fine-Tuning (SFT) followed by Reinforcement Learning from AI Feedback (RLAIF). This approach allows small open models to learn efficient tool usage and reasoning. Empirically, a Qwen3-8B model trained with our recipe surpasses GPT-4o by 2.3 points on SWE-QA-Pro and substantially narrows the gap to state-of-the-art proprietary models, demonstrating both the validity of our evaluation and the effectiveness of our agentic training workflow.

ACL 2026

SWE-QA-Pro: A Representative Benchmark and Scalable Training Recipe for Repository-Level Code Understanding

It is my great pleasure and honor to welcome you to the 64th Annual Meeting of the Association for Computational Linguistics (ACL 2026), held in San Diego, California, USA, July 2–7, 2026. ACL 2026 continues our fields tradition of excellence in scholarship, innovation, and inclusivity, and I am deeply grateful to the many volunteers who have worked tirelessly to bring this event to life.

It is exciting to see the many developments in the field reflected at our conference, such as the advancement of large language models (born out of our community) into many application directions. This is not without challenges, partly due to unsolved problems, and partly due to misuse of the technology. All this is reflected well at ACL 2026. The conference also reflects that the field is not only about advancing technology, but also the science of fundamentally understanding language and how it is use by many different speaker communities. <br>
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The 64th Annual Meeting of the Association for Computational Linguistics (ACL 2026) will take place in San Diego, California, from July 2 - 7, 2026.

poster

Existing in-context editing (ICE) methods for multi-hop knowledge editing commonly suffer from paraphrase sensitivity, which refers to the phenomenon where these methods are not sufficiently robust to paraphrased multi-hop questions. To improve retrieval accuracy and knowledge routing to address paraphrase sensitivity, this paper proposes a novel entity-aware inference-time knowledge routing method, referred to as EAIR, which consists of four major steps: 1) Entity-referential query decomposition, which decomposes the original question into multiple entity-referential sub-question instructions; 2) Entity-aware retrieval, which leverages the previously reference-resolved topic entity in the retrieval step; 3) Evidence-conditioned contrastive decoding, which discourages the model from relying on its parametric knowledge and steers the model toward following retrieved edits; 4) Reflection-based knowledge routing, which additionally filters decoding results using refusal-style reflection to mitigate the risk introduced by contrastive decoding. Experimental results across the MQuAKE benchmark family and model scales show that EAIR achieves the highest strict case accuracy in 11 of 12 settings, substantially reducing paraphrase sensitivity.

EAIR: Entity-aware Inference-Time Knowledge Routing for Multi-Hop Knowledge Editing

Training data is a critical and often proprietary asset in Large Language Model (LLM) development, motivating the use of data watermarking to embed model-transferable signals for usage verification. We identify low coverage as a vital yet largely overlooked requirement for practicality, as individual data owners typically contribute only a minute fraction of massive training corpora. Prior methods fail to maintain stealthiness, verification feasibility, or robustness when only one or a few sequences can be modified. To address these limitations, we introduce SLIM, a framework enabling per-user data provenance verification under strict black-box access. SLIM leverages intrinsic LLM properties to induce a Latent-Space Confusion Zone by training the model to map semantically similar prefixes to divergent continuations. This manifests as localized generation instability, which can be reliably detected via hypothesis testing. Experiments demonstrate that SLIM achieves ultra-low coverage capability, strong black-box verification performance, and great scalability while preserving both stealthiness and model utility, offering a robust solution for protecting training data in modern LLM pipelines.

 SLIM: Stealthy Low-Coverage Black-Box Watermarking via Latent-Space Confusion Zones

Prior work synthesizes tool-use LLM datasets by first generating a user query, followed by complex tool-use annotations like DFS. This inherently leads to inevitable annotation failures and low efficiency in data generation. We introduce ToolGrad, an agentic framework that inverts this paradigm. ToolGrad first constructs valid tool-use chains through an iterative process guided by textual "gradients", and then synthesizes corresponding user queries. This "answer-first" approach led to ToolGrad-500, a dataset generated with more complex tool use, lower cost, and almost 100% pass rate. Experiments show that models trained on ToolGrad-500 outperform those trained on expensive baseline datasets and proprietary LLMs.

ToolGrad: Efficient Tool-use Dataset Generation with Textual “Gradients”

Knowledge Tracing (KT) aims to model student's knowledge state and predict future performance to enable personalized learning in Intelligent Tutoring Systems. However, traditional KT methods face fundamental limitations in explainability, as they rely solely on the response correctness, neglecting the rich information embedded in students' problem-solving processes. To address this gap, we propose Knowledge Tracing Leveraging Problem-Solving Process (KT-PSP), which incorporates students' problem-solving processes to capture the multidimensional aspects of mathematical proficiency. We also introduce KT-PSP-25, a new dataset specifically designed for KT-PSP. Building on this, we present StatusKT, a KT framework that employs a teacher-student-teacher three-stage LLM pipeline to extract students' Mathematical Proficiency (MP) as intermediate representation. In this pipeline, the teacher LLM first extracts problem-specific proficiency indicators, then a student LLM generates responses based on the student's solution process, and a teacher LLM evaluates these responses to determine mastery of each indicator. The experimental results on KT-PSP-25 demonstrate that StatusKT improves the prediction performance of existing KT methods. Moreover, StatusKT provides interpretable explanations for its predictions by explicitly modeling students' mathematical proficiency. Code is available \href{https://github.com/jungyangpark/KT-PSP-25}{here}.

Tracing Mathematical Proficiency Through Problem-Solving Processes

Recent advances in large language models (LLMs) have enabled molecular reasoning for property prediction. However, toxicity arises from complex biological mechanisms beyond chemical structure, necessitating mechanistic reasoning for reliable prediction. Despite its importance, current benchmarks fail to systematically evaluate this capability. LLMs can generate fluent but biologically unfaithful explanations, making it difficult to assess whether predicted toxicities are grounded in valid mechanisms. To bridge this gap, we introduce ToxReason, a benchmark grounded in the Adverse Outcome Pathway (AOP) that evaluates organ-level toxicity reasoning across multiple organs. ToxReason integrates experimental drug–target interaction evidence with toxicity labels, requiring models to infer both toxic outcomes and their underlying mechanisms from Molecular Initiating Event (MIE) to Adverse Outcome (AO). Using ToxReason, we evaluate toxicity prediction performance and reasoning quality across diverse LLMs. We find that strong predictive performance does not necessarily imply reliable reasoning. Furthermore, we show that reasoning-aware training improves mechanistic reasoning and, consequently, toxicity prediction performance. Together, these results underscore the necessity of integrating reasoning into both evaluation and training for trustworthy toxicity modeling.

ToxReason: A Benchmark for Mechanistic Chemical Toxicity Reasoning via Adverse Outcome Pathway

Reinforcement learning with verifiable reward (RLVR) has become a promising paradigm for post-training large language models (LLMs) to improve their reasoning capability. However, when the rollout accuracy is low on hard problems, the reward becomes sparse, limiting learning efficiency and causing exploration bottlenecks. Existing approaches either rely on teacher models for distillation or filter out difficult problems, which limits scalability or restricts reasoning improvement through exploration.

We propose EvoCoT, a self-evolving curriculum learning framework based on two-stage chain-of-thought (CoT) reasoning optimization. EvoCoT constrains the exploration space by self-generating and verifying CoT trajectories, then gradually shortens CoT steps to expand the space in a controlled way. The framework enables LLMs to stably learn from initially unsolved hard problems under sparse rewards. We apply EvoCoT to multiple LLM families, including Qwen, DeepSeek, and Llama. Experiments show that EvoCoT enables LLMs to solve previously unsolved problems, improves reasoning capability without external CoT supervision, and is compatible with various RL fine-tuning methods. We release the source code to support future research.

EvoCoT: Overcoming the Exploration Bottleneck in Reinforcement Learning for LLMs

Reliable evaluation is essential for understanding large language model (LLM) performance, yet today's go-to metrics, namely token-overlap scores (e.g., ROUGE) and embedding-based measures (e.g., BERTScore), often misjudge semantic similarity of documents. Our study shows that both token-overlap metrics and embedding-based metrics routinely assign nearly identical scores to texts that directly contradict each other, thereby potentially masking fundamental errors. We introduce MATCHA, an automatic metric that jointly rewards semantic agreement with a reference and penalizes contradictions. MATCHA employs a dual-view perspective that measures (i) proximity to the gold text and (ii) distance from an adversarially generated counterfactual contradiction. In eight public benchmarks, MATCHA outperforms popular metrics, compared with human annotations on question-answering, image caption generation, natural language inference, summarization, and semantic textual similarity tasks. On the TruthfulQA dataset (i.e., a dataset without a training set, where no embedding-based metrics could locally train on), this improvement in terms of matching texts with a reference reaches 18.38\% over ROUGE-L and 20.82\% over BERTScore. Both quantitative comparison and qualitative human assessments confirm the efficacy and validity of MATCHA and uncover fundamental weaknesses in pre-existing metrics. Compared with 23 embedding models, including top state-of-the-art ones, used as a metric similar to BERTScore, MATCHA remains the most accurate in distinguishing correct from incorrect statements solely based on a reference. Our code and metric are publicly available (https://github.com/Siran-Li/MATCHA).

MATCHA: Matching Text via Contrastive Semantic Alignment

We present semantic-pragmatic specification and annotation (ellipsis, coreference, bridging and discourse relations, information structure, scope of negation) in the multi-layer, genre-diversified, 3+ million-token Prague Dependency Treebank – Consolidated 2. 0. While morphology and syntax work almost exclusively on sentence level, the semantic-pragmatic phenomena are often related to two or more neighbouring sentences and possibly to an extra-linguistic context. In the contribution, we describe these phenomena from both the linguistic perspective (form of expression, relation to syntax and morphology) and the cognitive perspective (relation to context, real world knowledge, as well as to the related processes such as thinking or reasoning) – classifying the possible relations between the semantic-pragmatic units into cognitively plausible, distinguishable, and human-understandable categories. We have applied our results to the corpus, by annotating it in its entirety. The resulting dataset is publicly and freely available, to serve for verification and further investigation of (not only) these phenomena.

Semantic-pragmatic Annotations in the Prague Dependency Treebank

Time series forecasting underpins critical decision-making across diverse domains. While large language models (LLMs) offer promising reasoning capabilities, existing LLM-based time series forecasting approaches either reduce them to numerical predictors that bypass their strengths, or allow direct forecast generation that destabilizes predictions in non-stationary settings. We introduce CTRL, a framework that decouples semantic reasoning from quantitative prediction. A frozen backbone generates base forecasts, while specialized LLM agents function as controllers that analyze backbone prediction errors through decomposed trend, seasonal, and irregular components, grounding reasoning in interpretable temporal structure. Each agent outputs compact control signals that a lightweight residual decoder translates into forecast corrections. CTRL incorporates label-free test-time adaptation that detects distribution shift from input statistics alone and readapts control signals with only 3--24 LLM calls via caching. CTRL is explicitly designed to improve robustness under non-stationary temporal dynamics and distribution shift, while remaining competitive on highly stationary time series where adaptive correction provides limited additional benefit.

CTRL: Control-Based Time Series Forecasting with LLM-Guided Residual Learning

While Large Language Models (LLMs) excel at generalized reasoning, standard retrieval-augmented approaches fail to address the disconnected nature of long-term agentic memory. To bridge this gap, we introduce Synapse (Synergistic Associative Processing & Semantic Encoding), a unified memory architecture that transcends static vector similarity. Drawing from cognitive science, Synapse models memory as a dynamic graph where relevance emerges from spreading activation rather than pre-computed links. By integrating lateral inhibition and temporal decay, the system dynamically highlights relevant sub-graphs while filtering interference. We implement a Triple Hybrid Retrieval strategy that fuses geometric embeddings with activation-based graph traversal. Extensive evaluations on the LoCoMo benchmark show that Synapse significantly outperforms state-of-the-art methods in complex temporal and multi-hop reasoning tasks, offering a robust solution to the "Contextual Tunneling" problem.

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EAIR: Entity-aware Inference-Time Knowledge Routing for Multi-Hop Knowledge Editing

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