AAAI 2026

January 23, 2026

Singapore, Singapore

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Automated cancer segmentation in Whole Slide Images (WSIs) has been dominated by a paradigm of static pattern recognition, where even advanced methods leveraging Transformers, Multiple Instance Learning, or topology-aware losses remain fundamentally descriptive and correlational. To address this limitation, we reframe WSI segmentation from a descriptive task to one of causal process modeling. We introduce Topo-GraT, a novel framework featuring a Causal Growth Field (CGF) to model tumor invasion dynamics and a Causal Flow Attention (CFA) mechanism that embeds this field as an architectural prior. This causal engine is integrated within an iterative graph refinement loop that uses segmentation uncertainty to dynamically focus computational resources on the most ambiguous tissue regions. Our comprehensive experiments on multiple WSI datasets demonstrate that Topo-GraT establishes a new state-of-the-art, significantly outperforming existing methods and reducing the 95% Hausdorff Distance, a key boundary metric, by over 15%. Crucially, our framework yields the CGF as a rich, interpretable output whose structure correlates with tumor aggressiveness, positioning it as a novel biomarker for downstream prognostic tasks. By shifting the paradigm from static recognition to causal reasoning, Topo-GraT offers a more robust, efficient, and clinically insightful approach, setting a new direction for the causally-aware medical image analysis.

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